{
  "_id": "6a351dd63efcd9bda43e29d0",
  "Package": "dotgen",
  "Title": "Gene-Set Analysis via Decorrelation by Orthogonal Transformation",
  "Version": "0.1.0",
  "Date": "2020-11-03",
  "Description": "Decorrelates a set of summary statistics (i.e., Z-scores\nor P-values per SNP) via Decorrelation by Orthogonal\nTransformation (DOT) approach and performs gene-set analyses by\ncombining transformed statistic values; operations are\nperformed with algorithms that rely only on the association\nsummary results and the linkage disequilibrium (LD). For more\ndetails on DOT and its power, see Olga (2020)\n<doi:10.1371/journal.pcbi.1007819>.",
  "Authors@R": "c(\nperson(\"Olga\", \"Vsevolozhskaya\", email = \"ovs222@@g.uky.edu\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-9376-3645\")),\nperson(\"Dmitri\", \"Zaykin\", email = \"zaykin@@gmail.com\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-9444-2859\")),\nperson(\"Xiaoran\", \"Tong\", email = \"tongxia1@msu.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4648-3330\")))",
  "License": "GPL (>= 2)",
  "URL": "https://github.com/xiaoran831213/dotgen",
  "Encoding": "UTF-8",
  "Author": "Olga Vsevolozhskaya [aut]\n(<https://orcid.org/0000-0001-9376-3645>), Dmitri Zaykin [aut]\n(<https://orcid.org/0000-0002-9444-2859>), Xiaoran Tong [aut,\ncre] (<https://orcid.org/0000-0002-4648-3330>)",
  "Maintainer": "Xiaoran Tong <tongxia1@msu.edu>",
  "RoxygenNote": "7.1.1",
  "Roxygen": "list(markdown = TRUE)",
  "Repository": "https://xiaoran831213.r-universe.dev",
  "Date/Publication": "2020-11-23 20:11:14 UTC",
  "RemoteUrl": "https://github.com/xiaoran831213/dotgen",
  "RemoteRef": "HEAD",
  "RemoteSha": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-19 10:43:19 UTC",
    "User": "root"
  },
  "MD5sum": "3bb8e969b8d38ea158bebdff4c9e4d5b",
  "_user": "xiaoran831213",
  "_type": "src",
  "_file": "dotgen_0.1.0.tar.gz",
  "_fileid": "c4adfdc01661ea3c5eaac71892baf9aac65b2e2edd1d386c526f2498242fadd9",
  "_filesize": 133583,
  "_sha256": "c4adfdc01661ea3c5eaac71892baf9aac65b2e2edd1d386c526f2498242fadd9",
  "_created": "2026-06-19T10:43:19.000Z",
  "_published": "2026-06-19T10:45:42.543Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 82333816710,
      "time": 92,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7747796911"
    },
    {
      "job": 82333816717,
      "time": 96,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7747798272"
    },
    {
      "job": 82333816713,
      "time": 79,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7747792291"
    },
    {
      "job": 82333816721,
      "time": 97,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7747797808"
    },
    {
      "job": 82333460714,
      "time": 138,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7747766795"
    },
    {
      "job": 82333816708,
      "time": 105,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7747800496"
    },
    {
      "job": 82333816743,
      "time": 76,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7747791611"
    },
    {
      "job": 82333816739,
      "time": 52,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7747784654"
    },
    {
      "job": 82333816734,
      "time": 90,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7747796418"
    }
  ],
  "_buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/xiaoran831213/dotgen",
  "_commit": {
    "id": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
    "author": "xt <tongxia1@msu.edu>",
    "committer": "xt <tongxia1@msu.edu>",
    "message": "finalize v0.0.1 release.\n",
    "time": 1606162274
  },
  "_maintainer": {
    "name": "Xiaoran Tong",
    "email": "tongxia1@msu.edu",
    "orcid": "0000-0002-4648-3330"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "mvtnorm",
      "role": "Depends"
    }
  ],
  "_owner": "xiaoran831213",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 7682214,
    "type": "user",
    "name": "XRT",
    "followers": 4
  },
  "_downloads": {
    "count": 613,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dotgen"
  },
  "_devurl": "https://github.com/xiaoran831213/dotgen",
  "_searchresults": 23,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/dotgen.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/xiaoran831213/dotgen",
  "_realowner": "xiaoran831213",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2020-11-16"
    },
    {
      "version": "0.1.1",
      "date": "2024-10-27"
    }
  ],
  "_exports": [
    "cst",
    "dot",
    "dot_art",
    "dot_arta",
    "dot_chisq",
    "dot_fisher",
    "dot_rtp",
    "dot_tpm",
    "zsc"
  ],
  "_help": [],
  "_rundeps": [
    "mvtnorm"
  ],
  "_score": 2.361727836017593,
  "_indexed": true,
  "_nocasepkg": "dotgen",
  "_universes": [
    "xiaoran831213"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-06-19T10:45:00.000Z",
      "distro": "noble",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "bb4e662965d0723c84020d7fe737bc019e198408b799f1a2320a3f41e0a869da",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-06-19T10:45:01.000Z",
      "distro": "noble",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "cacb7ad8dbb7b86b27c24e727254cdd846a9346354ccc542547343fd9c275978",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-06-19T10:44:45.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "3c861acd8c241f47f4aff02402bb2e8a926019b26098dd058bb4482ad655776d",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-06-19T10:45:01.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "4c8cd9078c55c4ad28c7ea437cbe48b9172b9b678e82e17c273eef4a160870c8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-06-19T10:45:16.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "2705faa82545da2fa6a101dcd029d39a817e6a12666885c49534b66f362a3ca5",
      "status": "success",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-19T10:44:37.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "b745e6ddf5800f89e0f009a80fcc818ca8c279297c1f92ebb0579cf7bd536df8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-19T10:44:16.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "f7b05a8f8eeea6e6753132a1ac05949e1879440c5abc408adb6f55a71873c1b3",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-06-19T10:44:54.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "f74655a521ca4cde45aabaeda77bcd854689d25e474f69a9bf18601ca0b868fa",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/27820875802"
    }
  ]
}