{
  "_id": "6a1ee2e0b401979e73410df0",
  "Package": "dotgen",
  "Title": "Gene-Set Analysis via Decorrelation by Orthogonal Transformation",
  "Version": "0.1.0",
  "Date": "2020-11-03",
  "Description": "Decorrelates a set of summary statistics (i.e., Z-scores\nor P-values per SNP) via Decorrelation by Orthogonal\nTransformation (DOT) approach and performs gene-set analyses by\ncombining transformed statistic values; operations are\nperformed with algorithms that rely only on the association\nsummary results and the linkage disequilibrium (LD). For more\ndetails on DOT and its power, see Olga (2020)\n<doi:10.1371/journal.pcbi.1007819>.",
  "Authors@R": "c(\nperson(\"Olga\", \"Vsevolozhskaya\", email = \"ovs222@@g.uky.edu\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-9376-3645\")),\nperson(\"Dmitri\", \"Zaykin\", email = \"zaykin@@gmail.com\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-9444-2859\")),\nperson(\"Xiaoran\", \"Tong\", email = \"tongxia1@msu.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4648-3330\")))",
  "License": "GPL (>= 2)",
  "URL": "https://github.com/xiaoran831213/dotgen",
  "Encoding": "UTF-8",
  "Author": "Olga Vsevolozhskaya [aut]\n(<https://orcid.org/0000-0001-9376-3645>), Dmitri Zaykin [aut]\n(<https://orcid.org/0000-0002-9444-2859>), Xiaoran Tong [aut,\ncre] (<https://orcid.org/0000-0002-4648-3330>)",
  "Maintainer": "Xiaoran Tong <tongxia1@msu.edu>",
  "RoxygenNote": "7.1.1",
  "Roxygen": "list(markdown = TRUE)",
  "Repository": "https://xiaoran831213.r-universe.dev",
  "Date/Publication": "2020-11-23 20:11:14 UTC",
  "RemoteUrl": "https://github.com/xiaoran831213/dotgen",
  "RemoteRef": "HEAD",
  "RemoteSha": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-20 06:44:42 UTC",
    "User": "root"
  },
  "MD5sum": "6c8b038339382b0404faf5110e51bc32",
  "_user": "xiaoran831213",
  "_type": "src",
  "_file": "dotgen_0.1.0.tar.gz",
  "_fileid": "6da1f57332e4e7e6ff198a0fd9c5772d77f42041116dfeaf8ebdda4dbd6299e6",
  "_filesize": 133226,
  "_sha256": "6da1f57332e4e7e6ff198a0fd9c5772d77f42041116dfeaf8ebdda4dbd6299e6",
  "_created": "2026-05-20T06:44:42.000Z",
  "_published": "2026-06-02T14:04:16.193Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79088884817,
      "time": 111,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7103070693"
    },
    {
      "job": 79088885962,
      "time": 136,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7103077109"
    },
    {
      "job": 79088884750,
      "time": 145,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7103073227"
    },
    {
      "job": 79088884748,
      "time": 166,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7103074167"
    },
    {
      "job": 79088883688,
      "time": 149,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7103041616"
    },
    {
      "job": 79088884045,
      "time": 146,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7359918531"
    },
    {
      "job": 79088884560,
      "time": 63,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7103058233"
    },
    {
      "job": 79088886290,
      "time": 88,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7103064828"
    },
    {
      "job": 79088886325,
      "time": 61,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7103057688"
    }
  ],
  "_buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/xiaoran831213/dotgen",
  "_commit": {
    "id": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
    "author": "xt <tongxia1@msu.edu>",
    "committer": "xt <tongxia1@msu.edu>",
    "message": "finalize v0.0.1 release.\n",
    "time": 1606162274
  },
  "_maintainer": {
    "name": "Xiaoran Tong",
    "email": "tongxia1@msu.edu",
    "orcid": "0000-0002-4648-3330"
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "mvtnorm",
      "role": "Depends"
    }
  ],
  "_owner": "xiaoran831213",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 7682214,
    "type": "user",
    "name": "Xiaoran"
  },
  "_downloads": {
    "count": 683,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dotgen"
  },
  "_devurl": "https://github.com/xiaoran831213/dotgen",
  "_searchresults": 21,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/dotgen.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/xiaoran831213/dotgen",
  "_realowner": "xiaoran831213",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2020-11-16"
    },
    {
      "version": "0.1.1",
      "date": "2024-10-27"
    }
  ],
  "_exports": [
    "cst",
    "dot",
    "dot_art",
    "dot_arta",
    "dot_chisq",
    "dot_fisher",
    "dot_rtp",
    "dot_tpm",
    "zsc"
  ],
  "_help": [],
  "_rundeps": [
    "mvtnorm"
  ],
  "_score": 2.3222192947339195,
  "_indexed": true,
  "_nocasepkg": "dotgen",
  "_universes": [
    "xiaoran831213"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-20T06:46:38.000Z",
      "distro": "noble",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "6a387a34a3b01a7bc30704d8b93bb6093b4bf57e5955f2a886e16239453f63ed",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-20T06:47:05.000Z",
      "distro": "noble",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "d42eb55effe1308dd9c4530bc8e60274c29f1bead525448d2d17c3960ec71532",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-20T06:46:51.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "8a3cfab5480cb6d21257a2c7d6f2fe6e72b015cd515dc46d8308f35c97fb70e8",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-20T06:46:54.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "268f33ff6472cd76b27f99f06e783656c54c9c936a0b3aed40401b1fd355c154",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-20T06:45:49.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "ccfa9ab545701796f271a6ec168928c061b837da3849855088788313b2a1a920",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-20T06:46:14.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "0dfd0cdfbb12f597c6fdd75a0c3c2997b2c4822208e88c95cb6bbc77b318ea7f",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-20T06:45:47.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "f9c388fc805e2f8b66b28f43d182e20ce9586dac5bbd7451536c5a8b4afac865",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-06-02T14:02:18.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "39b2d1e5759795233f47dd67e2b7f54834e199d1110c2521821084366bbcc023",
      "status": "success",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/26146056638"
    }
  ]
}