{
  "_id": "6a5c88e99baadeef8ab513e6",
  "Package": "dotgen",
  "Title": "Gene-Set Analysis via Decorrelation by Orthogonal Transformation",
  "Version": "0.1.0",
  "Date": "2020-11-03",
  "Description": "Decorrelates a set of summary statistics (i.e., Z-scores\nor P-values per SNP) via Decorrelation by Orthogonal\nTransformation (DOT) approach and performs gene-set analyses by\ncombining transformed statistic values; operations are\nperformed with algorithms that rely only on the association\nsummary results and the linkage disequilibrium (LD). For more\ndetails on DOT and its power, see Olga (2020)\n<doi:10.1371/journal.pcbi.1007819>.",
  "Authors@R": "c(\nperson(\"Olga\", \"Vsevolozhskaya\", email = \"ovs222@@g.uky.edu\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-9376-3645\")),\nperson(\"Dmitri\", \"Zaykin\", email = \"zaykin@@gmail.com\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-9444-2859\")),\nperson(\"Xiaoran\", \"Tong\", email = \"tongxia1@msu.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-4648-3330\")))",
  "License": "GPL (>= 2)",
  "URL": "https://github.com/xiaoran831213/dotgen",
  "Encoding": "UTF-8",
  "Author": "Olga Vsevolozhskaya [aut]\n(<https://orcid.org/0000-0001-9376-3645>), Dmitri Zaykin [aut]\n(<https://orcid.org/0000-0002-9444-2859>), Xiaoran Tong [aut,\ncre] (<https://orcid.org/0000-0002-4648-3330>)",
  "Maintainer": "Xiaoran Tong <tongxia1@msu.edu>",
  "RoxygenNote": "7.1.1",
  "Roxygen": "list(markdown = TRUE)",
  "Repository": "https://xiaoran831213.r-universe.dev",
  "Date/Publication": "2020-11-23 20:11:14 UTC",
  "RemoteUrl": "https://github.com/xiaoran831213/dotgen",
  "RemoteRef": "HEAD",
  "RemoteSha": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-07-19 08:18:32 UTC",
    "User": "root"
  },
  "_user": "xiaoran831213",
  "_type": "src",
  "_file": "dotgen_0.1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/b4bf5348d03a0a2d1dbf28af1881c6c71d8440d0afc38a30f3e53dc6a966da50",
  "_filesize": 133218,
  "_sha256": "b4bf5348d03a0a2d1dbf28af1881c6c71d8440d0afc38a30f3e53dc6a966da50",
  "_expires": "2026-10-27T08:20:56.000Z",
  "_created": "2026-07-19T08:18:32.000Z",
  "_published": "2026-07-19T08:20:57.642Z",
  "_jobs": [
    {
      "job": 88173243907,
      "time": 105,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "8440129691"
    },
    {
      "job": 88173243910,
      "time": 101,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8440128830"
    },
    {
      "job": 88173243897,
      "time": 71,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "8440123593"
    },
    {
      "job": 88173243904,
      "time": 94,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8440127880"
    },
    {
      "job": 88173030798,
      "time": 161,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8440112946"
    },
    {
      "job": 88173243924,
      "time": 79,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8440125718"
    },
    {
      "job": 88173243928,
      "time": 72,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "8440124748"
    },
    {
      "job": 88173243914,
      "time": 69,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "8440124541"
    },
    {
      "job": 88173243943,
      "time": 62,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "WARNING",
      "artifact": "8440122999"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588",
  "_status": "success",
  "_upstream": "https://github.com/xiaoran831213/dotgen",
  "_commit": {
    "id": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
    "author": "xt <tongxia1@msu.edu>",
    "committer": "xt <tongxia1@msu.edu>",
    "message": "finalize v0.0.1 release.\n",
    "time": 1606162274
  },
  "_maintainer": {
    "name": "Xiaoran Tong",
    "email": "tongxia1@msu.edu",
    "orcid": "0000-0002-4648-3330"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "mvtnorm",
      "role": "Depends"
    }
  ],
  "_owner": "xiaoran831213",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_userbio": {
    "uuid": 7682214,
    "type": "user",
    "name": "XRT",
    "followers": 4
  },
  "_downloads": {
    "count": 479,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/dotgen"
  },
  "_devurl": "https://github.com/xiaoran831213/dotgen",
  "_searchresults": 23,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/dotgen.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/xiaoran831213/dotgen",
  "_realowner": "xiaoran831213",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.0",
      "date": "2020-11-16"
    },
    {
      "version": "0.1.1",
      "date": "2024-10-27"
    }
  ],
  "_exports": [
    "cst",
    "dot",
    "dot_art",
    "dot_arta",
    "dot_chisq",
    "dot_fisher",
    "dot_rtp",
    "dot_tpm",
    "zsc"
  ],
  "_help": [],
  "_rundeps": [
    "mvtnorm"
  ],
  "_score": 2.361727836017593,
  "_indexed": true,
  "_nocasepkg": "dotgen",
  "_universes": [
    "xiaoran831213"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-07-19T08:20:26.000Z",
      "distro": "resolute",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/4dd325e282d54c157d57574a89cd58ea020bc8a3e45ca17e2e831cf9658e81c0",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-07-19T08:20:22.000Z",
      "distro": "resolute",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/e49dc9aef208d4fd3da093afb88218b059af496e00698aead5bd308808d91b14",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-07-19T08:19:48.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/befb791b6257fdebf6f84b47bfbcd95d07ba70795ca5f7c234aa1af784709cc5",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-07-19T08:20:13.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/33a11f1f1e51a0966ae4f42d8ea1b2b25397fc5216651fdbba587cb022d131b7",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-07-19T08:20:07.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/197bc5b80b4550c6fb69bcc74af75aa8f5ccebfa5934a6c754f1429321233326",
      "status": "success",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-19T08:19:49.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/175013f6e44e7db668fd8bad0414b7cd0536f9b8572d18acacde6edd0c005d10",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-19T08:19:48.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/896828d04d3ae54562822670c0baeee9a720818a4b51413b134b5868265a6573",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-07-19T08:19:39.000Z",
      "commit": "89960cae63a0110541d2f7cee0dcb76d74b8b913",
      "fileid": "https://r2.ropensci.org/7159d5874b11fcd9c690ce02c6f0d211503582344763f8da029f4c3b0d9ee3c2",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/xiaoran831213/actions/runs/29679515588"
    }
  ]
}